WebAug 27, 2024 · Description Efficient phylogenomic software by maximum likelihood. More information: http://www.iqtree.org/ Running Program Version 1.6.12, installed in /apps/eb/IQ-TREE/1.6-12-foss-2024b To use this version of IQ-TREE, please first load the module with module load IQ-TREE/1.6.12-foss-2024b WebIQ-TREE web server Installation For Windows users For Mac OS X users Minimal command-line examples → Read All Getting Started Here Web Server Tutorial A quick starting guide …
RCAC - Knowledge Base: Biocontainers: cfsan-snp-pipeline
WebApr 15, 2016 · W-IQ-TREE performs fast model selection, partition scheme finding, efficient tree reconstruction, ultrafast bootstrapping, branch tests, and tree topology tests. All computations are conducted on a... WebApr 15, 2016 · IQ-TREE ( 1 ), the successor of the TREE-PUZZLE program ( 2 ), is an efficient and versatile phylogenetic software for maximum likelihood analysis of large phylogenetic data. IQ-TREE explores the tree space efficiently and often achieves higher likelihoods than RAxML ( 3) and PhyML ( 4 ). tap in lightly
How to specify several outgroups in IQ-TREE?
WebApr 21, 2024 · Here, we present for the first time an automated SNP-typing method (MINTyper), that based on long-read sequencing can infer the same clonal clusters as methods based on short-read sequencing. WebJan 6, 2012 · Link to section 'IQ-TREE' of 'iqtree' IQ-TREE Link to section 'Introduction' of 'iqtree' Introduction IQ-TREE is an efficient phylogenomic... Skip to main content Bell Degraded Capacity — September 28, 2024 Updated: December 10, 2024 10:46am EST WebA phylogeny, based on the core-genome alignment, will be created by IQ-Tree. Optionally a recombination-masked core-genome alignment can be created with ClonalFrameML and maskrc-svg. tap in hair extensions pictures